BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H08SP1|AL428629
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig224 1615 0.0
>3x_Contig224
Length = 2261
Score = 1615 bits (807), Expect = 0.0
Identities = 834/850 (98%), Gaps = 1/850 (0%)
Strand = Plus / Minus
Query: 1 gatcgtaatgagatgtgatttatgcatatactgamaggttgctatcagctctgtccctaa 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 878 gatcgtaatgagatgtgatttatgcatatactgaaaggttgctatcagctctgtccctaa 819
Query: 61 tctaagattaaagtaagamagaaacaaacaaacaaaacagtcttagttacagtgaaaaat 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 tctaagattaaagtaagaaagaaacaaacaaacaaaacagtcttagttacagtgaaaaat 759
Query: 121 ggcaccaaaagtctcagaaacggacgcagcggccgcagcggccgctggnaattmatttva 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
Sbjct: 758 ggcaccaaaagtctcagaaacggacgcagcggccgcagcggccgctggcaattaatttaa 699
Query: 181 tcttcttttgcccagaggccggttaaaaactagtgttttctgtgttctgcggcggttact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tcttcttttgcccagaggccggttaaaaactagtgttttctgtgttctgcggcggttact 639
Query: 241 gtgtgactcgagcgaagatgccttcgatggggaaaatgtttatctgtgtttggcggtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gtgtgactcgagcgaagatgccttcgatggggaaaatgtttatctgtgtttggcggtggt 579
Query: 301 gcgtgggtgcgtacatgtacggaaggcactggcgagagtttctttytttcttccagattc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 578 gcgtgggtgcgtacatgtacggaaggcactggcgagagtttctttttttcttccagattc 519
Query: 361 gtttttgtggcaagaataaacgggaaggagttgccgtatgtctttgccggtaacacccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gtttttgtggcaagaataaacgggaaggagttgccgtatgtctttgccggtaacacccat 459
Query: 421 acacttttgtgaacacgtgaccttatagaactctctcaactagaatgcattctcaattac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 acacttttgtgaacacgtgaccttatagaactctctcaactagaatgcattctcaattac 399
Query: 481 agtggattagatcagttctgcaattgayactccaaccttgaagcggcggggaatttsayc 540
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
Sbjct: 398 agtggattagatcagttctgcaattgatactccaaccttgaagcggcggggaatttgatc 339
Query: 541 ctgatgataaatctcacacggattcgcacgatagcgttgtggttttsacgaaatgtgtta 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 338 ctgatgataaatctcacacggattcgcacgatagcgttgtggttttgacgaaatgtgtta 279
Query: 601 tytcactaccattgccactctttagtytggatacatggaaaggcccagtacaatgacact 660
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 278 tttcactaccattgccactctttagtttggatacatggaaaggcccagtacaatgacact 219
Query: 661 cttgatgtattaatcgccgaaggcgttctctctttcagccgatcaggataattgcagcct 720
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 218 cttgatgtattaatcgccgaaggcgttttctctttcagccgatcaggataattgcagcct 159
Query: 721 ctgtaatgatacttcggttatccagtgtatgcttgaagttatgcgagggaagtaggcaac 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 158 ctgtaatgatacttcggttatccagtgtatgcttgaagttatgcgagggaagtagggaac 99
Query: 781 gggagagggtaatgtatctgtgatatctatgtatatkttcaagtaacctttgacgatgat 840
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 98 gggagagggtaatgtatctgtgatatctatgtatatgttcaagt-acctttgacgatgat 40
Query: 841 gttctgttgt 850
||||||||||
Sbjct: 39 gttctgttgt 30
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4219
Number of Sequences: 1807
Number of extensions: 4219
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)